Glossophaga mutica

Merriam's long-tongued bat

Included in the VGP and BAT1K.


metadata.yaml (view) (edit on github)
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mGloMut1 77.22 Gbp 31.71x 55.5 GiB
PacBio HiFi (.bam) mGloMut1 77.23 Gbp 31.71x 263.5 GiB
Arima mGloMut1 146.90 Gbp 60.32x 79.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 14 May 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mGloMut1 PacBio HiFi (.fq) 77.22 Gbp 31.71x 55.5 GiB
PacBio HiFi (.bam) 77.23 Gbp 31.71x 263.5 GiB
Arima 146.90 Gbp 60.32x 79.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 14 May 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 16 April 2024
mGloMut1.hap1.cur.20240416.fasta.gz (586.9 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 196.02 Mbp 2 224.30 Mbp
20 3 167.70 Mbp 3 219.48 Mbp
30 5 121.10 Mbp 4 213.30 Mbp
40 7 86.54 Mbp 5 177.89 Mbp
50 10 65.08 Mbp 6 169.73 Mbp
60 14 55.43 Mbp 8 133.53 Mbp
70 20 36.18 Mbp 10 115.37 Mbp
80 29 18.09 Mbp 13 67.59 Mbp
90 0 0
100 0 0
0.887x 128 2.16 Gbp 81 2.16 Gbp
NG based on genome size 2.44 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 5 December 2023
mGloMut1.hap2.cur.20231205.fasta.gz (585.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 131.90 Mbp 2 222.90 Mbp
20 4 112.98 Mbp 3 218.70 Mbp
30 6 106.27 Mbp 4 213.11 Mbp
40 9 77.31 Mbp 5 178.00 Mbp
50 12 61.73 Mbp 6 169.57 Mbp
60 17 47.67 Mbp 8 134.19 Mbp
70 22 36.60 Mbp 10 115.28 Mbp
80 31 21.01 Mbp 13 67.59 Mbp
90 0 0
100 0 0
0.886x 116 2.16 Gbp 71 2.16 Gbp
NG based on genome size 2.44 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 13 September 2023
mGloMut1.MT.20230913.fasta.gz (5.3 KiB)

Quality: not computed
Assembly Metadata
assembly_vgp_HiC_2.0/mGloMut1_hap1.yml (view)
assembly_vgp_HiC_2.0/mGloMut1_hap2.yml (view)
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.