Myripristis murdjan
pinecone soldierfish
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
Resource | Primary Assembly | Alternate Assembly |
---|---|---|
GenBank | fMyrMur1: GCA_902150065.1 | fMyrMur1: GCA_902148815.1 |
ENA | fMyrMur1: GCA_902150065.1 | fMyrMur1: GCA_902148815.1 |
UCSC Genome Browser | fMyrMur1: GCA_902150065.1 | fMyrMur1: GCA_902148815.1 |
metadata.yaml (view) (edit on github) |
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CC BY 2.0 Rickard Zerpe (flickr)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 1 May 2019.
Coverage based on genome size 0.84 Gbp.
Last upload on 1 May 2019.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
fMyrMur1 | PacBio CLR | 49.44 Gbp | 59.19x | 85.7 GiB | |
10x | 144.84 Gbp | 173.40x | 81.5 GiB | ||
Bionano | N/A | 1539.69x | 1.8 GiB | ||
Arima | 136.22 Gbp | 163.09x | 84.3 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 1 May 2019.
Coverage based on genome size 0.84 Gbp.
Last upload on 1 May 2019.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 21 June 2019
fMyrMur1.pri.cur.20190621.fasta.gz (241.6 MiB)
Quality: 49.6 errors/Mb (QV=43.05)
Version assembly_curated from 21 June 2019
fMyrMur1.pri.cur.20190621.fasta.gz (241.6 MiB)
Quality: 49.6 errors/Mb (QV=43.05)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 27.28 Mbp | 1 | 42.40 Mbp |
20 | 6 | 24.31 Mbp | 3 | 39.21 Mbp |
30 | 9 | 20.03 Mbp | 6 | 36.53 Mbp |
40 | 14 | 17.27 Mbp | 8 | 35.81 Mbp |
50 | 19 | 14.48 Mbp | 10 | 34.95 Mbp |
60 | 27 | 8.34 Mbp | 13 | 33.92 Mbp |
70 | 39 | 5.79 Mbp | 15 | 33.42 Mbp |
80 | 57 | 3.78 Mbp | 18 | 31.82 Mbp |
90 | 89 | 1.76 Mbp | 20 | 29.23 Mbp |
100 | 339 | 862 bp | 86 | 862 bp |
1.000x | 340 | 0.83 Gbp | 87 | 0.84 Gbp |
NG based on genome size 0.84 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 21 June 2019
fMyrMur1.alt.cur.20190621.fasta.gz (237.9 MiB)
Quality: not computed
Version assembly_curated from 21 June 2019
fMyrMur1.alt.cur.20190621.fasta.gz (237.9 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 28 | 2.17 Mbp | 28 | 2.19 Mbp |
20 | 75 | 1.38 Mbp | 74 | 1.39 Mbp |
30 | 144 | 1.03 Mbp | 143 | 1.03 Mbp |
40 | 236 | 0.79 Mbp | 235 | 0.79 Mbp |
50 | 353 | 0.61 Mbp | 352 | 0.61 Mbp |
60 | 506 | 487.33 Kbp | 505 | 487.33 Kbp |
70 | 691 | 394.59 Kbp | 690 | 394.59 Kbp |
80 | 930 | 291.95 Kbp | 929 | 292.76 Kbp |
90 | 1284 | 183.65 Kbp | 1282 | 183.83 Kbp |
100 | 2198 | 481 bp | 2192 | 810 bp |
1.000x | 2199 | 0.82 Gbp | 2193 | 0.82 Gbp |
NG based on genome size 0.84 Gbp.
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.