Rhea pennata
lesser rhea
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
Resource | Primary Assembly | Alternate Assembly |
---|---|---|
GenBank | bPtePen1: GCA_028389875.1 | bPtePen1: GCA_028389885.1 |
ENA | bPtePen1: GCA_028389875.1 | bPtePen1: GCA_028389885.1 |
UCSC Genome Browser | bPtePen1: GCA_028389875.1 | bPtePen1: GCA_028389885.1 |
metadata.yaml (view) (edit on github) |
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CC BY-SA 3.0 CHUCAO (Wikimedia)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 1.65 Gbp.
Last upload on 3 May 2022.
Coverage based on genome size 1.65 Gbp.
Last upload on 3 May 2022.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size 1.65 Gbp.
Last upload on 3 May 2022.
Coverage based on genome size 1.65 Gbp.
Last upload on 3 May 2022.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 17 June 2022
bPtePen1.pri.cur.20220617.fasta.gz (358.3 MiB)
Quality: not computed
Version assembly_curated from 17 June 2022
bPtePen1.pri.cur.20220617.fasta.gz (358.3 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 42.60 Mbp | 0 | 216.94 Mbp |
20 | 6 | 36.49 Mbp | 1 | 164.82 Mbp |
30 | 12 | 23.26 Mbp | 2 | 130.21 Mbp |
40 | 20 | 18.64 Mbp | 4 | 82.47 Mbp |
50 | 30 | 12.99 Mbp | 7 | 41.21 Mbp |
60 | 47 | 7.58 Mbp | 13 | 24.52 Mbp |
70 | 82 | 2.98 Mbp | 23 | 9.40 Mbp |
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.771x | 307 | 1.27 Gbp | 179 | 1.27 Gbp |
NG based on genome size 1.65 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 17 June 2022
bPtePen1.alt.cur.20220617.fasta.gz (29.2 MiB)
Quality: not computed
Version assembly_curated from 17 June 2022
bPtePen1.alt.cur.20220617.fasta.gz (29.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 0 | 0 | ||
20 | 0 | 0 | ||
30 | 0 | 0 | ||
40 | 0 | 0 | ||
50 | 0 | 0 | ||
60 | 0 | 0 | ||
70 | 0 | 0 | ||
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.063x | 1126 | 104.45 Mbp | 1125 | 104.45 Mbp |
NG based on genome size 1.65 Gbp.
Assembly Metadata
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.