Symphodus melops

corkwing wrasse

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank fSymMel2: GCA_947650265.1 fSymMel2: GCA_947650305.1
ENA fSymMel2: GCA_947650265.1 fSymMel2: GCA_947650305.1
UCSC Genome Browser fSymMel2: GCA_947650265.1 fSymMel2: GCA_947650305.1

metadata.yaml (view) (edit on github)
species:
  short_name: fSymMel
  name: Symphodus melops
  taxon_id: 171736
  common_name: corkwing wrasse
  order:
    name: Perciformes
  family:
    name: Labridae
  individuals:
    - short_name: fSymMel2
      biosample_id: SAMEA12219485
      sex:
  genome_size: 968220000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fSymMel2 19.97 Gbp 20.63x 11.9 GiB
Arima fSymMel2 115.53 Gbp 119.33x 34.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.97 Gbp.
Last upload on 8 February 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fSymMel2 PacBio HiFi (.bam) 19.97 Gbp 20.63x 11.9 GiB
Arima 115.53 Gbp 119.33x 34.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.97 Gbp.
Last upload on 8 February 2023.
Assemblies
Individual 2 Primary Assembly
Version assembly_curated from 8 March 2023
fSymMel2.pri.cur.20230308.fasta.gz (175.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 28 2.59 Mbp 2 31.25 Mbp
20 72 1.89 Mbp 5 29.43 Mbp
30 133 1.31 Mbp 8 27.80 Mbp
40 222 0.88 Mbp 12 26.26 Mbp
50 371 450.90 Kbp 16 24.07 Mbp
60 736 150.56 Kbp 20 20.49 Mbp
70 0 0
80 0 0
90 0 0
100 0 0
0.657x 1774 0.64 Gbp 395 0.64 Gbp
NG based on genome size 0.97 Gbp.
Individual 2 Alternate Assembly
Version assembly_curated from 8 March 2023
fSymMel2.alt.cur.20230308.fasta.gz (169.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 95 0.79 Mbp 95 0.79 Mbp
20 250 0.51 Mbp 250 0.51 Mbp
30 483 339.97 Kbp 483 339.97 Kbp
40 832 223.88 Kbp 832 223.88 Kbp
50 1415 117.44 Kbp 1415 117.44 Kbp
60 3013 30.17 Kbp 3013 30.18 Kbp
70 0 0
80 0 0
90 0 0
100 0 0
0.625x 4140 0.61 Gbp 4139 0.61 Gbp
NG based on genome size 0.97 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.